Rv0890c - transcriptional regulator, luxR-family

Expression: Most Significant Conditions for Rv0890c

Protein Domains

Gene Information
Locus	Rv0890c
Symbol
Gene Name	transcriptional regulator, luxR-family
Location	989948 - 992596 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:2649 bp Protein:883 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	27369
Related Genes	Acel_1642 ML1753 MT0914 MT0918 MT1402 Rv0894 Rv1358
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv0890c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv0890c Transcript 1
MRALLAQNRLVTLCGTGGVGKTRLAIQIASASELRDGLCFVDLAPITESGIVAATAARAV
GLPDQPGRSTMDSLRRFIGNRRMLMVLDNCEHLLDACAALVVELLGACPELTILATSREP
IGMAGEITWRVPSMSITDEAVELFADRASRVQPGFTIANHNAAAVGEICRRLDGIPLAIE
FAAARVRSMSPLEIADGLDDCFRLLAGGVRGAVQRQQTLRASIDWSHALLTETEQILFRR
LAPFVGGFDLAAVRAVAAGSDLDPFSVLDQLTLLVDKSLVVADDCQGRTRYRLLETVRRY
ALEKLGDSGEADVHARHRDYYTALAASLNTPADNDHQRLVARAETEIDNLRAAFAWSREN
GHITEALQLASSLQPIWFGRAHLREGLSWFNSILEDQRFHRLAVSTAVRARALADKAMLS
TWLATSPVGATDIIAPAQQALAMAREVGDPAALVRALTACGCSSGYNAEAAAPYFAEATD
LARAIDDKWTLCQILYWRGVGTCISGDPNALRAAAEECRDLADTIGDRFVSRHCSLWLSL
AQMWAGNLTEALELSREITAEAEASNDVPTKVLGLYTQAQVLAYCGASAAHAIAGACIAA
ATELGGVYQGIGYAAMTYAALAAGDVTAALEASDAARPILRAQPDQVTMHQVLMAQLALA
GGDAIAARQFANDAVDATNGWHRMVALTIRARVATARGEPELARDDAHAALACGAELHIY
QGMPDAMELLAGLAGEVGSHSEGVRLLGAAAALRQQTRQVRFKIWDAGYQASVTALREAM
GDEDFDRAWAEGAALSTDEAIAYAQRGRGERKRPARGWGSLTPTERDVVRLVSEGLSNKD
IAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVDEAARRGSPS*

Genomic Sequence

>Rv0890c
GTGCGGGCACTGTTGGCGCAGAACCGGCTCGTGACGCTATGCGGAACCGGCGGTGTCGGC
AAGACCCGTCTGGCAATCCAGATCGCGAGTGCATCCGAACTTCGCGACGGTTTGTGCTTT
GTCGATCTGGCCCCGATCACTGAATCCGGGATCGTCGCAGCCACGGCTGCGCGCGCCGTG
GGTCTGCCCGATCAGCCGGGCCGTTCAACCATGGATAGTCTTCGCCGATTCATCGGCAAT
CGCCGCATGCTCATGGTGTTGGACAACTGTGAACATCTTCTCGATGCGTGCGCAGCGTTG
GTCGTTGAGCTATTGGGGGCCTGTCCGGAGCTGACGATCTTAGCGACTAGCCGGGAGCCG
ATCGGGATGGCCGGCGAGATCACCTGGCGCGTACCGTCGATGTCGATAACCGACGAAGCA
GTCGAATTGTTTGCTGACCGAGCCAGCCGAGTTCAGCCCGGGTTCACCATCGCCAATCAC
AACGCCGCGGCCGTCGGCGAGATCTGCCGGCGGCTAGACGGCATACCGCTGGCGATCGAG
TTCGCTGCCGCACGGGTGCGGTCGATGTCACCGCTCGAGATTGCCGACGGTCTGGACGAC
TGTTTCCGGCTGTTGGCCGGCGGTGTGCGGGGCGCGGTGCAGCGCCAGCAGACACTTCGC
GCCTCGATCGATTGGTCGCATGCACTGCTGACCGAGACCGAGCAAATCTTGTTTCGGCGA
CTGGCGCCATTTGTCGGCGGGTTCGACCTCGCCGCGGTGCGGGCGGTCGCCGCCGGTAGC
GACCTGGATCCGTTTTCGGTGCTTGATCAGCTGACCCTGCTGGTAGACAAGTCGCTGGTG
GTGGCCGACGACTGCCAGGGCCGCACGCGGTACCGGCTGCTGGAAACGGTGCGTCGGTAC
GCGCTGGAAAAACTGGGCGACTCCGGCGAGGCCGATGTGCACGCACGTCACCGTGACTAC
TACACGGCGCTGGCCGCCTCACTCAACACTCCTGCGGACAACGATCACCAACGGCTTGTC
GCCCGGGCTGAGACCGAGATCGACAACCTGCGCGCCGCGTTCGCCTGGAGCCGGGAAAAT
GGCCATATCACCGAAGCGTTACAGCTCGCATCTTCGCTGCAACCAATCTGGTTCGGGCGG
GCGCACCTGCGCGAGGGGTTGTCCTGGTTCAACTCGATCCTGGAAGACCAAAGGTTCCAC
CGGCTCGCTGTGTCAACAGCAGTACGGGCGCGAGCGCTCGCTGACAAGGCAATGCTCAGT
ACCTGGCTGGCCACCAGTCCGGTAGGCGCCACCGACATCATCGCTCCCGCACAACAAGCG
CTGGCGATGGCACGTGAGGTGGGCGACCCCGCCGCGTTGGTGCGGGCGCTCACCGCCTGC
GGCTGTAGCAGTGGCTACAACGCGGAGGCCGCTGCGCCCTATTTCGCCGAAGCGACCGAC
CTGGCACGCGCTATTGACGACAAATGGACGCTGTGTCAAATCCTCTACTGGCGGGGGGTG
GGGACCTGCATATCAGGTGACCCGAATGCTTTGCGAGCCGCGGCAGAAGAATGCCGCGAC
CTGGCCGACACCATCGGCGACCGGTTCGTCTCACGTCACTGCAGCTTGTGGCTTAGTTTG
GCGCAGATGTGGGCTGGCAATCTGACCGAAGCCCTCGAGCTATCCAGGGAAATCACTGCC
GAGGCCGAGGCATCCAACGATGTGCCGACAAAGGTTCTCGGCCTATATACCCAAGCCCAG
GTGCTGGCGTATTGCGGCGCCAGCGCGGCCCACGCCATAGCCGGGGCGTGCATTGCAGCC
GCGACGGAGTTAGGCGGTGTGTACCAAGGCATTGGTTATGCGGCGATGACGTACGCCGCG
CTGGCCGCCGGTGATGTCACGGCAGCGCTCGAGGCCAGCGACGCGGCGCGGCCGATTCTT
AGGGCCCAGCCCGACCAGGTGACCATGCACCAGGTCCTGATGGCGCAGTTAGCCCTGGCA
GGAGGTGATGCGATCGCCGCACGACAGTTCGCCAACGACGCCGTCGATGCGACCAATGGG
TGGCACCGAATGGTGGCGTTGACAATACGCGCGCGCGTAGCCACCGCACGGGGCGAACCA
GAACTGGCGCGCGATGATGCTCATGCTGCGCTGGCGTGCGGCGCCGAGCTGCACATCTAC
CAGGGCATGCCAGATGCCATGGAACTCCTCGCCGGCCTGGCCGGCGAGGTCGGCAGTCAC
TCCGAAGGTGTCCGCCTTCTCGGTGCCGCAGCCGCCCTTCGGCAACAGACACGTCAGGTC
CGCTTCAAGATTTGGGATGCCGGCTACCAGGCCTCGGTGACGGCGCTTCGTGAGGCGATG
GGTGATGAGGATTTCGACCGCGCCTGGGCCGAGGGGGCCGCCTTGTCCACCGACGAGGCG
ATCGCATATGCACAACGCGGTCGCGGTGAACGCAAGCGACCGGCCCGCGGGTGGGGCTCG
TTGACCCCGACCGAACGCGACGTCGTGCGGTTGGTCAGCGAGGGGTTATCCAACAAGGAC
ATTGCAAAACGGCTTTTCGTCTCGCCGCGCACTGTGCAAACCCACCTCACCCACGTCTAC
GCCAAACTTGGCTTGCCCTCCCGAGTACAACTGGTAGACGAGGCGGCACGCCGCGGCTCA
CCCTCGTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007